doc. RNDr. Radka Svobodová, Ph.D.

Head of Core Facility, Biological Data Management and Analysis Core Facility

Office: bldg. C04/233
Kamenice 753/5
625 00 Brno

Phone:	+420 549 49 4860
E‑mail:

social and academic networks:

Basic information

Supervision

Qualifications

Publications

Type

Total number of publications: 177

2019

Creation and visualization of secondary structure consensus for protein families

MIDLIK Adam HUTAŘOVÁ VAŘEKOVÁ Ivana HUTAŘ Jan NAVRÁTILOVÁ Veronika KOČA Jaroslav BERKA Karel SVOBODOVÁ VAŘEKOVÁ Radka

Appeared in Conference without Proceedings

Year: 2019, type: Appeared in Conference without Proceedings
Exploring trends in quality and features of biomacromolecular complexes with ValTrendsDB

HORSKÝ Vladimír BENDOVÁ Veronika TOUŠEK Dominik KOČA Jaroslav SVOBODOVÁ VAŘEKOVÁ Radka

Conference abstract

Year: 2019, type: Conference abstract
Interactive exploration of trends in biomacromolecule structure quality with ValTrendsDB

HORSKÝ Vladimír BENDOVÁ Veronika TOUŠEK Dominik SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

Conference abstract

Year: 2019, type: Conference abstract
Partial atomic charges for proteins

SCHINDLER Ondřej RAČEK Tomáš SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

Conference abstract

Year: 2019, type: Conference abstract
Protein Data Bank: the single global archive for 3D macromolecular structure data

BURLEY S.K. BERMAN H.M. BHIKADIYA C. BI C.X. CHEN L. DI COSTANZO L. CHRISTIE C. DUARTE J.M. DUTTA S. FENG Z.K. GHOSH S. GOODSELL D.S. GREEN R.K. GURANOVIC V. GUZENKO D. HUDSON B.P. LIANG Y.H. LOWE R. PEISACH E. PERISKOVA I. RANDLE C. ROSE A. SEKHARAN M. SHAO CH. TAO Y.P. VALASATAVA Y. VOIGT M. WESTBROOK J. YOUNG J. ZARDECKI C. ZHURAVLEVA M. KURISU G. NAKAMURA H. KENGAKU Y. CHO H. SATO J. KIM J.Y. IKEGAWA Y. NAKAGAWA A. YAMASHITA R. KUDOU T. BEKKER G.J. SUZUKI H. IWATA T. YOKOCHI M. KOBAYASHI N. FUJIWARA T. VELANKAR S. KLEYWEGT G.J. ANYANGO S. ARMSTRONG D.R. BERRISFORD J.M. CONROY M.J. DANA J.M. DESHPANDE M. GANE P. GÁBOROVÁ Romana GUPTA D. GUTMANAS A. KOČA Jaroslav MAK L. MIR S. MUKHOPADHYAY A. NADZIRIN N. NAIR S. PATWARDHAN A. PAYSAN-LAFOSSE T. PRAVDA Lukáš SALIH O. SEHNAL David VARADI M. SVOBODOVÁ VAŘEKOVÁ Radka MARKLEY J.L. HOCH J.C. ROMERO P.R. BASKARAN K. MAZIUK D. ULRICH E.L. WEDELL J.R. YAO H.Y. LIVNY M. IOANNIDIS Y.E.

Article in Periodical

Nucleic Acids Research, year: 2019, volume: 47, edition: D1, DOI
The bio.tools registry of software tools and data resources for the life sciences

ISON Jon IENASESCU Hans CHMURA Piotr RYDZA Emil MÉNAGER Hervé KALAŠ Matúš SCHWÄMMLE Veit GRÜNING Björn BEARD Niall LOPEZ Rodrigo DUVAUD Severine STOCKINGER Heinz PERSSON Bengt SVOBODOVÁ VAŘEKOVÁ Radka RAČEK Tomáš VONDRÁŠEK Jiří PETERSON Hedi SALUMETS Ahto JONASSEN Inge HOOFT Rob NYRÖNEN Tommi VALENCIA Alfonso CAPELLA Salvador GELPÍ Josep ZAMBELLI Federico SAVAKIS Babis LESKOŠEK Brane RAPACKI Kristoffer BLANCHET Christophe JIMENEZ Rafael OLIVEIRA Arlindo VRIEND Gert COLLIN Olivier HELDEN Jacques van LONGREEN Peter BRUNAK Soren

Article in Periodical

GENOME BIOLOGY, year: 2019, volume: 20, edition: 164, DOI
ValTrendsDB: bringing Protein Data Bank validation information closer to the user

HORSKÝ Vladimír BENDOVÁ Veronika TOUŠEK Dominik KOČA Jaroslav SVOBODOVÁ VAŘEKOVÁ Radka

Article in Periodical

Bioinformatics, year: 2019, volume: 35, edition: 24, DOI
ValTrendsDB: bringing Protein Data Bank validation information closer to the user

HORSKÝ Vladimír SVOBODOVÁ VAŘEKOVÁ Radka BENDOVÁ Veronika TOUŠEK Dominik KOČA Jaroslav

Conference abstract

Year: 2019, type: Conference abstract
ValTrendsDB: Database of biomacromolecular structure validation trends

HORSKÝ Vladimír BENDOVÁ Veronika TOUŠEK Dominik KOČA Jaroslav SVOBODOVÁ VAŘEKOVÁ Radka

Year: 2019
ValTrendsDB: Enabling comparison of quality and features of biomacromolecular complexes to the global trend

HORSKÝ Vladimír BENDOVÁ Veronika TOUŠEK Dominik KOČA Jaroslav SVOBODOVÁ VAŘEKOVÁ Radka

Conference abstract

Year: 2019, type: Conference abstract

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