doc. Mgr. David Bednář, Ph.D.

2022

• Computer-aided engineering of staphylokinase toward enhanced affinity and selectivity for plasmin

  NIKITIN Dmitri MIČAN Jan TOUL Martin BEDNÁŘ David PEŠKOVÁ Michaela KITTOVÁ Patrícia THALEROVÁ Sandra VÍTEČEK Jan DAMBORSKÝ Jiří MIKULÍK Robert FLEISHMAN Sarel J. PROKOP Zbyněk MAREK Martin

  Article in Periodical

  Computational and Structural Biotechnology Journal, year: 2022, volume: 20, edition: May 2022, DOI

• Deep Insights into the Specific Evolution of Fungal Hybrid B Heme Peroxidases

  ZÁMOCKÝ Marcel MUSIL Miloš DANCHENKO Maksym FERIANC Peter CHOVANOVÁ Katarína BARÁTH Peter POLJOVKA Andrej BEDNÁŘ David

  Article in Periodical

  BIOLOGY-BASEL, year: 2022, volume: 11, edition: 3, DOI

• DESIGN AND SYNTHESIS OF N-HYDROXY-CINNAMAMIDE DERIVATES AS NOVEL HDAC INHIBITORS: EVALUATION OF BIOLOGICAL ACTIVITY IN CANCER CELLS

  ONUŠČÁKOVÁ Magdaléna PÍŽOVÁ Hana KAUEROVÁ Tereza HAMŠÍKOVÁ Marie BEDNÁŘ David KOLLÁR Peter BOBÁĽ Pavel

  Article in Proceedings

  Czech Chemical Society Symposium Series, year: 2022

• Fast approximative methods for study of ligand transport and rational design of improved enzymes for biotechnologies

  VÁVRA Ondřej DAMBORSKÝ Jiří BEDNÁŘ David

  Article in Periodical

  Biotechnology Advances, year: 2022, volume: 60, edition: November, DOI

• Follistatin-like 1 and its paralogs in heart development and cardiovascular disease

  HOŘÁK Martin FAIRWEATHER DeLisa KOKKONEN Piia Pauliina BEDNÁŘ David DOBROVOLNÁ Julie

  Article in Periodical

  Heart Failure Reviews, year: 2022, volume: 27, edition: 6, DOI

• Fully automated virtual screening pipeline of FDA-approved drugs using Caver Web

  MUSIL Miloš JEŽÍK Andrej HAMŠÍKOVÁ Marie ŠTOURAČ Jan GALGONEK Jakub EYRILMEZ Saltuk Mustafa VONDRASEK Jiri DAMBORSKÝ Jiří BEDNÁŘ David

  Article in Periodical

  Computational and Structural Biotechnology Journal, year: 2022, volume: 20, edition: November 2022, DOI

• Hidden Potential of Highly Efficient and Widely Accessible Thrombolytic Staphylokinase

  TOUL Martin MIČAN Jan SLONKOVÁ Veronika NIKITIN Dmitri MAREK Martin BEDNÁŘ David DAMBORSKÝ Jiří PROKOP Zbyněk

  Article in Periodical

  Stroke, year: 2022, volume: 53, edition: 10, DOI

• LoopGrafter: a web tool for transplanting dynamical loops for protein engineering

  PLANAS IGLESIAS Joan OPÁLENÝ Filip ULBRICH Pavol ŠTOURAČ Jan SANUSI Zainab Kemi RANGEL PAMPLONA PIZARRO PINTO José Gaspar SMITH Andrea BYŠKA Jan DAMBORSKÝ Jiří KOZLÍKOVÁ Barbora BEDNÁŘ David

  Article in Periodical

  Nucleic acids research, year: 2022, volume: 50, edition: W1, DOI

• Mechanism-Based Design of Efficient PET Hydrolases

  WEI Ren VON HAUGWIT Gerlis PFAFF Lara MIČAN Jan BADENHORST Christoffel P. S. LIU Weidong WEBER Gert AUSTIN Harry P. BEDNÁŘ David DAMBORSKÝ Jiří BORNSCHEUER Uwe T.

  Article in Periodical

  ACS Catalysis, year: 2022, volume: 12, edition: 6, DOI

• Mechanism-Based Strategy for Optimizing HaloTag Protein Labeling

  MARQUES Sérgio Manuel SLÁNSKÁ Michaela CHMELOVÁ Klaudia CHALOUPKOVÁ Radka MAREK Martin CLARK Spencer DAMBORSKÝ Jiří KOOL Eric T. BEDNÁŘ David PROKOP Zbyněk

  Article in Periodical

  JACS AU, year: 2022, volume: 2, edition: 6, DOI