doc. Mgr. David Bednář, Ph.D.

2021

• Screening of Natural Compounds as P-Glycoprotein Inhibitors against Multidrug Resistance

  MARQUES Sérgio Manuel ŠUPOLÍKOVÁ Lucie MOLČANOVÁ Lenka ŠMEJKAL Karel BEDNÁŘ David SLANINOVÁ Iva

  Article in Periodical

  BIOMEDICINES, year: 2021, volume: 9, edition: 4, DOI

• Screening of world approved drugs against highly dynamical spike glycoprotein of SARS-CoV-2 using CaverDock and machine learning

  RANGEL PAMPLONA PIZARRO PINTO José Gaspar VÁVRA Ondřej MARQUES Sérgio Manuel FILIPOVIČ Jiří BEDNÁŘ David DAMBORSKÝ Jiří

  Article in Periodical

  Computational and Structural Biotechnology Journal, year: 2021, volume: 19, edition: May, DOI

• Simulation of Ligand Transport in Receptors Using CaverDock

  HOZZOVÁ Jana VÁVRA Ondřej BEDNÁŘ David FILIPOVIČ Jiří

  Chapter of a book

  Protein-Ligand Interactions and Drug Design, year: 2021, number of pages: 20 s.

• SoluProt: prediction of soluble protein expression in Escherichia coli

  HON Jiří MARUSIAK Martin MARTINEK Tomas KUNKA Antonín ZENDULKA Jaroslav BEDNÁŘ David DAMBORSKÝ Jiří

  Article in Periodical

  Bioinformatics, year: 2021, volume: 37, edition: 1, DOI

• Substrate inhibition by the blockage of product release and its control by tunnel engineering

  KOKKONEN Piia Pauliina BEIER Andy MAZURENKO Stanislav DAMBORSKÝ Jiří BEDNÁŘ David PROKOP Zbyněk

  Article in Periodical

  RSC Chemical Biology, year: 2021, volume: 2, edition: 2, DOI

• Thermostable FGF2 Polypeptide, Use Thereof

  DVOŘÁK Petr KREJČÍ Pavel BÁLEK Lukáš EISELLEOVÁ Lívia KONEČNÁ Žaneta DVOŘÁK Pavel BEDNÁŘ David BREZOVSKÝ Jan ŠEBESTOVÁ Eva CHALOUPKOVÁ Radka ŠTĚPÁNKOVÁ Veronika VAŇÁČEK Pavel PROKOP Zbyněk DAMBORSKÝ Jiří BOSÁKOVÁ Michaela

  Patent

  Publisher: Intellectual Property Office of Singapore (IPOS), state: Singapore, patent's number: SG11201804402W, year: 2021

• Thermostable FGF2 polypeptide, use thereof

  DVOŘÁK Petr KREJČÍ Pavel BÁLEK Lukáš EISELLEOVÁ Lívia KONEČNÁ Žaneta DVOŘÁK Pavel BEDNÁŘ David BREZOVSKÝ Jan ŠEBESTOVÁ Eva CHALOUPKOVÁ Radka ŠTĚPÁNKOVÁ Veronika VAŇÁČEK Pavel PROKOP Zbyněk DAMBORSKÝ Jiří BOSÁKOVÁ Michaela

  Patent

  Publisher: Australian Patent Office, state: Australia, patent's number: AU2016359722, year: 2021

2020

• A Haloalkane Dehalogenase from Saccharomonospora viridis Strain DSM 43017, a Compost Bacterium with Unusual Catalytic Residues, Unique (S)-Enantiopreference, and High Thermostability

  CHMELOVÁ Klaudia ŠEBESTOVÁ Eva LIŠKOVÁ Veronika BEIER Andy BEDNÁŘ David PROKOP Zbyněk CHALOUPKOVÁ Radka DAMBORSKÝ Jiří

  Article in Periodical

  Applied and Environmental Microbiology, year: 2020, volume: 86, edition: 17, DOI

• CaverDock: A Novel Method for the Fast Analysis of Ligand Transport

  FILIPOVIČ Jiří VÁVRA Ondřej PLHÁK Jan BEDNÁŘ David MARQUES Sérgio Manuel BREZOVSKÝ Jan MATYSKA Luděk DAMBORSKÝ Jiří

  Article in Periodical

  IEEE/ACM Transactions on Computational Biology and Bioinformatics, year: 2020, volume: 17, edition: 5, DOI

• Decoding the intricate network of molecular interactions of a hyperstable engineered biocatalyst

  MARKOVÁ Klára CHMELOVÁ Klaudia MARQUES Sérgio Manuel CARPENTIER Philippe BEDNÁŘ David DAMBORSKÝ Jiří MAREK Martin

  Article in Periodical

  Chemical Science, year: 2020, volume: 11, edition: 41, DOI