Project information
Specific ion effects for proteins in solutions and related biologically relevant systems
- Project Identification
- GA203/08/0114
- Project Period
- 1/2008 - 12/2012
- Investor / Pogramme / Project type
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Czech Science Foundation
- Standard Projects
- MU Faculty or unit
- Faculty of Science
- Keywords
- salt ions, enzymatic reactions, membranes, molecular dynamics, fluorescence spectroscopy
- Cooperating Organization
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J. Heyrovský Institute of Physical Chemistry of the ASCR, v. v. i.
- Responsible person doc. Martin Hof, Dr.
- Responsible person Doc. Mgr. Pavel Jungwirth, CSc.
- Responsible person Doc. RNDr. Rüdiger Ettrich, Ph.D.
The mechanism of hydration of ions and interaction of ions with biomolecules play an important role in many natural and biotechnological processes. We plan within this proposal to combine computational and experimental tools with the aim to obtain a fundamental molecular understanding of these reactions. We will focus on ion specific interactions with proteins in aqueous and non-aqueous solutions and at lipid membranes. Carefully designed molecular dynamics simulations and experiments will allow us in the end to formulate general rules for interactions of biologically relevant ions with solvated proteins and membranes, as well as rationalize ion effects on the activity of enzymes.
Publications
Total number of publications: 37
2010
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Effect of organic solvents on structure and function of haloalkane dehalogenases
Year: 2010, type: Appeared in Conference without Proceedings
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How do organic solvents affecthaloalkane dehalogenases of haloalkane dehalogenases?
Year: 2010, type: Appeared in Conference without Proceedings
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Characterization of novel haloalkane dehalogenase DhcA from extremophilic microorganism Hahella chejuensis KCTC 2396
Year: 2010, type: Appeared in Conference without Proceedings
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Investigation of Ligand Passage in Proteins Investigation of Ligand Passage in Proteins
Year: 2010, type: Appeared in Conference without Proceedings
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Protein Engineering of Biocatalysts
Year: 2010, type:
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Systems biology at work
Current Opinion in Biotechnology, year: 2010, volume: 21, edition: 21
2009
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.: Keyhole-Lock-Key Model: Engineering of Tunnels in Proteins with Buried Active Sites
Year: 2009, type:
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Computational Tools for Designing and Engineering Biocatalysts.
CURRENT OPINION IN BIOLOGICAL CHEMISTRY, year: 2009, volume: 1, edition: 13
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Computer-Assisted Engineering of Biomolecules
Year: 2009, type:
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Editorial: Protein Design and Engineering for Biocatalysis.
BIOTECHNOLOGY JOURNAL, year: 2009, volume: 2009, edition: 4